STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VYD3Os03g0392200 protein. (142 aa)    
Predicted Functional Partners:
A0A0P0VY85
Os03g0392250 protein.
      
 0.546
Q75KN5_ORYSJ
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.542
Q75KN8_ORYSJ
Small GTP-binding protein domain containing protein, expressed; Belongs to the small GTPase superfamily. Arf family.
      
 0.542
Q84R00_ORYSJ
cDNA clone:001-206-C11, full insert sequence.
      
 0.542
OST4B
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4B; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the e [...]
      
 0.510
CYCD2-3
Putative cyclin-D2-3; Belongs to the cyclin family. Cyclin D subfamily.
      
 0.472
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.