STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VYS5Os03g0375000 protein. (91 aa)    
Predicted Functional Partners:
Q336U8_ORYSJ
cDNA clone:J033133L07, full insert sequence.
    
 0.882
Q75GC3_ORYSJ
RNA pol II accessory factor, Cdc73 family protein, expressed.
    
 0.836
Q6ZD92_ORYSJ
Os08g0157100 protein.
   
 0.817
Q0E3Q8_ORYSJ
Os02g0160000 protein.
    
 0.812
Q6Z5P0_ORYSJ
cDNA clone:J013109D01, full insert sequence.
    
 0.812
Q8H9E4_ORYSJ
Putative TPR-containing nuclear phosphoprotein.
    
 0.784
A0A0N7KI28
Os03g0756500 protein.
    
 0.710
Q0D934_ORYSJ
Os07g0109600 protein.
    
 0.710
Q2QN51_ORYSJ
cDNA clone:002-108-C04, full insert sequence.
    
 0.710
A0A0P0WGT0
Os04g0693050 protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
    
 0.697
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.