STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0W059Os03g0612600 protein. (175 aa)    
Predicted Functional Partners:
RPL27
50S ribosomal protein L27, chloroplastic; Belongs to the bacterial ribosomal protein bL27 family.
  
 
 0.999
Q9LWD2_ORYSJ
cDNA clone:001-104-E12, full insert sequence.
  
 
 0.999
Q0JLK3_ORYSJ
Os01g0593500 protein.
  
0.998
Q8RVB1_ORYSJ
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.998
Q5W6B7_ORYSJ
cDNA clone:J023137E11, full insert sequence.
  
0.997
Q0DHP9_ORYSJ
Os05g0452600 protein.
   
 
 0.996
Q65XC5_ORYSJ
cDNA clone:J023015G24, full insert sequence.
  
 
 0.996
Q6I600_ORYSJ
cDNA clone:J013153H24, full insert sequence.
  
 
 0.996
Q6K241_ORYSJ
cDNA clone:006-201-D06, full insert sequence.
  
 
 0.996
Q6KA00_ORYSJ
cDNA clone:001-014-G04, full insert sequence.
  
 
 0.996
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.