STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0W0S0Os03g0616500 protein. (873 aa)    
Predicted Functional Partners:
Q0D620_ORYSJ
Os07g0517300 protein.
  
 0.999
Q2QP00_ORYSJ
G14587-6, putative, expressed.
  
 0.999
Q5N6W1_ORYSJ
Structural maintenance of chromosomes protein.
   
 0.999
A0A0P0WP88
Os05g0497150 protein.
   
 0.979
A0A0P0V3K8
Os01g0532800 protein.
   
 0.955
Q6ZC35_ORYSJ
Os08g0468400 protein.
   
  
 0.926
A0A0P0WVA8
Os06g0256000 protein.
   
 
 0.923
MCM4
DNA replication licensing factor MCM4; Probable component of the MCM2-7 complex (MCM complex) that may function as a DNA helicase and which is essential to undergo a single round of replication initiation and elongation per cell cycle in eukaryotic cells.
   
  
 0.900
A0A0N7KEM6
Os02g0133300 protein.
   
 0.897
A0A0P0VEI6
Os02g0133400 protein.
   
 0.897
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (22%) [HD]