Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0W185Os03g0669800 protein. (932 aa)    
Predicted Functional Partners:
Q94DY4_ORYSJ
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
    
 0.958
A0A0P0VRR2
Os02g0833200 protein.
    
 0.949
Q6ESB7_ORYSJ
cDNA clone:J033116E04, full insert sequence.
    
 0.949
C7J0W5_ORYSJ
Os04g0429200 protein; Belongs to the peptidase C19 family.
   
 0.935
A0A0P0X1C3
Os06g0728600 protein.
    
 0.912
Q10S92_ORYSJ
EF hand family protein, expressed.
    
 0.912
A0A0N7KR07
Os09g0484300 protein.
    
 0.867
Q5N773_ORYSJ
cDNA clone:J033043F13, full insert sequence.
    
 0.867
A0A0P0XY01
Os11g0104866 protein.
    
 0.866
A0A0P0Y653
Os12g0104766 protein.
    
 0.866
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: medium (72%) [HD]