Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0W403Os03g0781100 protein. (803 aa)    
Predicted Functional Partners:
Q6ESH8_ORYSJ
cDNA clone:J023103I17, full insert sequence; Belongs to the peptidase S8 family.
      
 0.662
Q6AUK4_ORYSJ
cDNA clone:002-133-B04, full insert sequence.
   
    0.646
Q10SI6_ORYSJ
Protein kinase domain containing protein, expressed.
    
 
 0.643
ERDJ2
DnaJ protein ERDJ2; May be required for integral membrane and secreted preprotein translocation across the endoplasmic reticulum membrane.
    
 
 0.635
Q5JMA6_ORYSJ
cDNA clone:J013069K22, full insert sequence.
      
 0.627
Q5VRR3_ORYSJ
Os06g0166200 protein.
    
 
 0.626
A0A0P0X294
Os07g0134400 protein.
      
 0.625
Q7XPR9_ORYSJ
cDNA clone:J023123N15, full insert sequence; Belongs to the peptidase S8 family.
      
 0.621
A0A0P0VS32
Os03g0107000 protein; Belongs to the SKP1 family.
      
 0.602
Q7X666_ORYSJ
Os04g0464600 protein.
    
 
 0.560
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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