Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0W478Os03g0774400 protein. (236 aa)    
Predicted Functional Partners:
A0A0P0XP17
Os09g0515400 protein.
   
  
 0.680
Q6ATY3_ORYSJ
Os05g0401300 protein.
      
 0.627
A0A0P0VR55
Os02g0815300 protein.
      
 0.626
Q0DTS5_ORYSJ
Os03g0227900 protein; Belongs to the protein kinase superfamily.
      
 0.623
Q2QTY6_ORYSJ
Lysosomal Cystine Transporter family protein, expressed.
      
 0.623
A0A0N7KSE7
Os11g0140700 protein.
      
 0.622
A0A0P0Y6T5
Os12g0137200 protein.
      
 0.622
Q94J17_ORYSJ
cDNA clone:001-039-H01, full insert sequence; Belongs to the universal ribosomal protein uL13 family.
   
  
 0.535
Q5VR43_ORYSJ
cDNA clone:J013071N06, full insert sequence.
      
 0.516
Q10CX9_ORYSJ
cDNA clone:001-002-H05, full insert sequence.
      
 0.512
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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