Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0W669Os04g0120100 protein. (218 aa)    
Predicted Functional Partners:
Q6K7G6_ORYSJ
cDNA, clone: J065219E22, full insert sequence.
  
     0.537
Q0E256_ORYSJ
Os02g0270200 protein; Belongs to the peptidase S8 family.
  
     0.536
Q0ITF8_ORYSJ
Os11g0261600 protein.
  
     0.536
Q0JIK4_ORYSJ
Os01g0795400 protein.
  
     0.536
A0A0P0XQ21
Os09g0530800 protein.
  
     0.534
A0A0P0VQA5
Os02g0779000 protein; Belongs to the peptidase S8 family.
  
     0.533
A0A0P0VHD8
Os02g0270900 protein; Belongs to the peptidase S8 family.
  
     0.532
A0A0P0VQH1
Os02g0780101 protein.
  
     0.530
A0A0P0V657
Os01g0660500 protein.
    
  0.430
Q7XHW1_ORYSJ
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
  0.430
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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