Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A0A0P0W6G1 | ARG1 | A0A0P0W6G1 | Q7X7N2 | Os04g0136500 protein. | Arginase 1, mitochondrial; Catalyzes the hydrolysis of L-arginine to urea and L- ornithine. The latter can be utilized in the urea cycle or as a precursor for the synthesis of both polyamines and proline (By similarity). | 0.927 |
| A0A0P0W6G1 | B7FA89_ORYSJ | A0A0P0W6G1 | B7FA89 | Os04g0136500 protein. | cDNA, clone: J100056P20, full insert sequence. | 0.894 |
| A0A0P0W6G1 | DAPF | A0A0P0W6G1 | Q2QNF7 | Os04g0136500 protein. | Diaminopimelate epimerase, chloroplastic. | 0.906 |
| A0A0P0W6G1 | OAT | A0A0P0W6G1 | Q10G56 | Os04g0136500 protein. | Ornithine aminotransferase, mitochondrial; Confers drought and oxidative stress tolerance mainly through enhancing ROS-scavenging capacity and Pro pre-accumulation. | 0.905 |
| A0A0P0W6G1 | PAO3 | A0A0P0W6G1 | Q7X809 | Os04g0136500 protein. | Polyamine oxidase 3; Flavoenzyme involved in polyamine back-conversion. Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine, spermidine and their acetyl derivatives. Substrate preference is spermidine > norspermine > thermospermine > N(1)-acetylspermine > spermine. No activity detected when putrescine is used as substrate. Plays an important role in the regulation of polyamine intracellular concentration (Probable). | 0.904 |
| A0A0P0W6G1 | PAO5 | A0A0P0W6G1 | Q0J954 | Os04g0136500 protein. | Polyamine oxidase 5; Flavoenzyme involved in polyamine back-conversion. Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine. Substrate preference is spermine > thermospermine > norspermine. No activity detected when putrescine, spermidine or N(1)-acetylspermidine are used as substrates. Plays an important role in the regulation of polyamine intracellular concentration (Probable). May play a role in producing hydrogen peroxide during seed germination (Probable). | 0.903 |
| A0A0P0W6G1 | Q69U93_ORYSJ | A0A0P0W6G1 | Q69U93 | Os04g0136500 protein. | cDNA clone:J033031K02, full insert sequence. | 0.892 |
| A0A0P0W6G1 | Q8LN35_ORYSJ | A0A0P0W6G1 | Q8LN35 | Os04g0136500 protein. | Ornithine cyclodeaminase/mu-crystallin family protein, putative, expressed. | 0.916 |
| A0A0P0W6G1 | Q93Y73_ORYSJ | A0A0P0W6G1 | Q93Y73 | Os04g0136500 protein. | Aspartate-semialdehyde dehydrogenase family protein, expressed. | 0.908 |
| A0A0P0W6G1 | SPDSYN1 | A0A0P0W6G1 | Q9SMB1 | Os04g0136500 protein. | Spermidine synthase 1; Belongs to the spermidine/spermine synthase family. | 0.928 |
| ARG1 | A0A0P0W6G1 | Q7X7N2 | A0A0P0W6G1 | Arginase 1, mitochondrial; Catalyzes the hydrolysis of L-arginine to urea and L- ornithine. The latter can be utilized in the urea cycle or as a precursor for the synthesis of both polyamines and proline (By similarity). | Os04g0136500 protein. | 0.927 |
| ARG1 | B7FA89_ORYSJ | Q7X7N2 | B7FA89 | Arginase 1, mitochondrial; Catalyzes the hydrolysis of L-arginine to urea and L- ornithine. The latter can be utilized in the urea cycle or as a precursor for the synthesis of both polyamines and proline (By similarity). | cDNA, clone: J100056P20, full insert sequence. | 0.939 |
| ARG1 | OAT | Q7X7N2 | Q10G56 | Arginase 1, mitochondrial; Catalyzes the hydrolysis of L-arginine to urea and L- ornithine. The latter can be utilized in the urea cycle or as a precursor for the synthesis of both polyamines and proline (By similarity). | Ornithine aminotransferase, mitochondrial; Confers drought and oxidative stress tolerance mainly through enhancing ROS-scavenging capacity and Pro pre-accumulation. | 0.983 |
| ARG1 | PAO3 | Q7X7N2 | Q7X809 | Arginase 1, mitochondrial; Catalyzes the hydrolysis of L-arginine to urea and L- ornithine. The latter can be utilized in the urea cycle or as a precursor for the synthesis of both polyamines and proline (By similarity). | Polyamine oxidase 3; Flavoenzyme involved in polyamine back-conversion. Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine, spermidine and their acetyl derivatives. Substrate preference is spermidine > norspermine > thermospermine > N(1)-acetylspermine > spermine. No activity detected when putrescine is used as substrate. Plays an important role in the regulation of polyamine intracellular concentration (Probable). | 0.716 |
| ARG1 | PAO5 | Q7X7N2 | Q0J954 | Arginase 1, mitochondrial; Catalyzes the hydrolysis of L-arginine to urea and L- ornithine. The latter can be utilized in the urea cycle or as a precursor for the synthesis of both polyamines and proline (By similarity). | Polyamine oxidase 5; Flavoenzyme involved in polyamine back-conversion. Catalyzes the oxidation of the secondary amino group of polyamines, such as spermine. Substrate preference is spermine > thermospermine > norspermine. No activity detected when putrescine, spermidine or N(1)-acetylspermidine are used as substrates. Plays an important role in the regulation of polyamine intracellular concentration (Probable). May play a role in producing hydrogen peroxide during seed germination (Probable). | 0.754 |
| ARG1 | Q8LN35_ORYSJ | Q7X7N2 | Q8LN35 | Arginase 1, mitochondrial; Catalyzes the hydrolysis of L-arginine to urea and L- ornithine. The latter can be utilized in the urea cycle or as a precursor for the synthesis of both polyamines and proline (By similarity). | Ornithine cyclodeaminase/mu-crystallin family protein, putative, expressed. | 0.943 |
| ARG1 | Q93Y73_ORYSJ | Q7X7N2 | Q93Y73 | Arginase 1, mitochondrial; Catalyzes the hydrolysis of L-arginine to urea and L- ornithine. The latter can be utilized in the urea cycle or as a precursor for the synthesis of both polyamines and proline (By similarity). | Aspartate-semialdehyde dehydrogenase family protein, expressed. | 0.545 |
| ARG1 | SPDSYN1 | Q7X7N2 | Q9SMB1 | Arginase 1, mitochondrial; Catalyzes the hydrolysis of L-arginine to urea and L- ornithine. The latter can be utilized in the urea cycle or as a precursor for the synthesis of both polyamines and proline (By similarity). | Spermidine synthase 1; Belongs to the spermidine/spermine synthase family. | 0.938 |
| B7FA89_ORYSJ | A0A0P0W6G1 | B7FA89 | A0A0P0W6G1 | cDNA, clone: J100056P20, full insert sequence. | Os04g0136500 protein. | 0.894 |
| B7FA89_ORYSJ | ARG1 | B7FA89 | Q7X7N2 | cDNA, clone: J100056P20, full insert sequence. | Arginase 1, mitochondrial; Catalyzes the hydrolysis of L-arginine to urea and L- ornithine. The latter can be utilized in the urea cycle or as a precursor for the synthesis of both polyamines and proline (By similarity). | 0.939 |
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