STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0W7P1Os04g0213500 protein. (870 aa)    
Predicted Functional Partners:
A0A0P0XJ91
Os09g0267600 protein.
    
 0.822
Q2QYF7_ORYSJ
SNF7 family protein, expressed.
    
 0.822
Q2RB64_ORYSJ
SNF7 family protein, expressed.
    
 0.822
Q69V59_ORYSJ
cDNA clone:006-307-G05, full insert sequence.
    
 0.822
Q7XHQ7_ORYSJ
cDNA clone:002-150-D10, full insert sequence.
    
 0.822
Q2R5L0_ORYSJ
HAD-superfamily phosphatase, subfamily IIIC containing protein, expressed.
    
 0.806
Q84R45_ORYSJ
Magnesium-dependent phosphatase-1 family protein, expressed.
    
 0.806
Q84R48_ORYSJ
Magnesium-dependent phosphatase-1 family protein, expressed.
    
 0.806
A0A0P0V1T6
Os01g0314700 protein.
    
 0.718
A0A0P0VRR2
Os02g0833200 protein.
    
 0.656
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.