Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0P0W9S2 | CCC11_ORYSJ | A0A0P0W9S2 | P93411 | Os04g0388601 protein. | Cyclin-C1-1; Belongs to the cyclin family. Cyclin C subfamily. | 0.666 |
A0A0P0W9S2 | CDKE-1 | A0A0P0W9S2 | Q336M2 | Os04g0388601 protein. | Cyclin-dependent kinase E-1; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. | 0.721 |
A0A0P0W9S2 | MED17 | A0A0P0W9S2 | Q2QLK7 | Os04g0388601 protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.695 |
A0A0P0W9S2 | MED20 | A0A0P0W9S2 | Q67UT1 | Os04g0388601 protein. | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.642 |
A0A0P0W9S2 | Q0J6D0_ORYSJ | A0A0P0W9S2 | Q0J6D0 | Os04g0388601 protein. | Os08g0333000 protein. | 0.669 |
A0A0P0W9S2 | Q5WMY5_ORYSJ | A0A0P0W9S2 | Q5WMY5 | Os04g0388601 protein. | cDNA clone:J023070E07, full insert sequence. | 0.655 |
A0A0P0W9S2 | Q69KN1_ORYSJ | A0A0P0W9S2 | Q69KN1 | Os04g0388601 protein. | cDNA, clone: J100045B11, full insert sequence. | 0.730 |
A0A0P0W9S2 | Q6ENK5_ORYSJ | A0A0P0W9S2 | Q6ENK5 | Os04g0388601 protein. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.669 |
A0A0P0W9S2 | Q6Z2J8_ORYSJ | A0A0P0W9S2 | Q6Z2J8 | Os04g0388601 protein. | Os02g0732700 protein. | 0.760 |
A0A0P0W9S2 | Q7F8R5_ORYSJ | A0A0P0W9S2 | Q7F8R5 | Os04g0388601 protein. | cDNA clone:001-007-F02, full insert sequence. | 0.730 |
CCC11_ORYSJ | A0A0P0W9S2 | P93411 | A0A0P0W9S2 | Cyclin-C1-1; Belongs to the cyclin family. Cyclin C subfamily. | Os04g0388601 protein. | 0.666 |
CCC11_ORYSJ | CDKE-1 | P93411 | Q336M2 | Cyclin-C1-1; Belongs to the cyclin family. Cyclin C subfamily. | Cyclin-dependent kinase E-1; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. | 0.999 |
CCC11_ORYSJ | MED17 | P93411 | Q2QLK7 | Cyclin-C1-1; Belongs to the cyclin family. Cyclin C subfamily. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.574 |
CCC11_ORYSJ | MED20 | P93411 | Q67UT1 | Cyclin-C1-1; Belongs to the cyclin family. Cyclin C subfamily. | Mediator of RNA polymerase II transcription subunit 20; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.612 |
CCC11_ORYSJ | Q0J6D0_ORYSJ | P93411 | Q0J6D0 | Cyclin-C1-1; Belongs to the cyclin family. Cyclin C subfamily. | Os08g0333000 protein. | 0.982 |
CCC11_ORYSJ | Q69KN1_ORYSJ | P93411 | Q69KN1 | Cyclin-C1-1; Belongs to the cyclin family. Cyclin C subfamily. | cDNA, clone: J100045B11, full insert sequence. | 0.693 |
CCC11_ORYSJ | Q6ENK5_ORYSJ | P93411 | Q6ENK5 | Cyclin-C1-1; Belongs to the cyclin family. Cyclin C subfamily. | Mediator of RNA polymerase II transcription subunit 14; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.982 |
CCC11_ORYSJ | Q6Z2J8_ORYSJ | P93411 | Q6Z2J8 | Cyclin-C1-1; Belongs to the cyclin family. Cyclin C subfamily. | Os02g0732700 protein. | 0.986 |
CCC11_ORYSJ | Q7F8R5_ORYSJ | P93411 | Q7F8R5 | Cyclin-C1-1; Belongs to the cyclin family. Cyclin C subfamily. | cDNA clone:001-007-F02, full insert sequence. | 0.997 |
CDKE-1 | A0A0P0W9S2 | Q336M2 | A0A0P0W9S2 | Cyclin-dependent kinase E-1; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. CDC2/CDKX subfamily. | Os04g0388601 protein. | 0.721 |
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