STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WAL1Os04g0429850 protein. (108 aa)    
Predicted Functional Partners:
Q10DD6_ORYSJ
Homeodomain protein JUBEL1, putative, expressed.
      
 0.542
Q8LNI5_ORYSJ
Shaggy-related protein kinase theta, putative, expressed; Belongs to the protein kinase superfamily.
      
 0.529
A0A0P0XX73
Os10g0536450 protein.
      
 0.524
Q7F1B4_ORYSJ
cDNA clone:J013108L21, full insert sequence.
      
 0.510
XOAT1
cDNA clone:J033058D09, full insert sequence.
      
 0.469
B9FF83_ORYSJ
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
      
 0.457
Q851M0_ORYSJ
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
      
 0.455
A0A0P0VY91
Os03g0348200 protein.
      
 0.432
Q2QZU5_ORYSJ
Auxin-repressed protein-like protein ARP1, putative, expressed.
      
 0.432
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.