Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WB07Os04g0440700 protein. (484 aa)    
Predicted Functional Partners:
Q8H3D8_ORYSJ
Os07g0655900 protein.
      
 0.539
Q7XML6_ORYSJ
cDNA clone:J033101G08, full insert sequence.
    
 
 0.478
Q0JP52_ORYSJ
cDNA clone:J033122L17, full insert sequence.
    
 
 0.477
A0A0N7KCX2
Os01g0347600 protein; Belongs to the peptidase C1 family.
   
 0.466
H0212B02.7
Oryzain alpha chain; Belongs to the peptidase C1 family.
   
 0.466
H0818H01.14
Oryzain beta chain; Probable thiol protease.
   
 0.466
Q6L4X7_ORYSJ
Os05g0508300 protein; Belongs to the peptidase C1 family.
   
 0.466
CP1
Cysteine protease 1; Cysteine protease that may play a role in pollen development. May be regulated by the transcription factor UDT1 in developing anthers and play a role in tapetum development. Positively regulated by the transcription factor TDR in developing anthers and may play a role in tapetum programmed cell death (PCD).
   
 0.466
CSLC7
Probable xyloglucan glycosyltransferase 7; Probable beta-1,4-glucan synthase rather involved in the synthesis of the xyloglucan backbone than cellulose. Seems to work simultaneously with xyloglucan 6-xylosyltransferase. Xyloglucan is a noncellulosic polysaccharides of plant cell wall and consists of a glucan backbone substituted by xylose, galactose and fucose (By similarity); Belongs to the glycosyltransferase 2 family. Plant cellulose synthase-like C subfamily.
    
 
 0.451
Q0IZN0_ORYSJ
Os09g0559900 protein.
    
 
 0.444
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.