Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A0P0WCK2Os04g0519200 protein. (263 aa)    
Predicted Functional Partners:
Q6ZH84_ORYSJ
cDNA clone:J013072E12, full insert sequence.
     
  0.513
Q7XK43_ORYSJ
Os04g0476800 protein.
     
  0.513
Q652S1_ORYSJ
cDNA clone:J013116E07, full insert sequence.
    
  0.512
RPA2C
Replication protein A 32 kDa subunit C; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions (By similarity).
    
  0.425
RPA2B
Replication protein A 32 kDa subunit B; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions (By similarity).
    
  0.425
RPA2A
Replication protein A 32 kDa subunit A; Component of the replication protein A complex (RPA) required for DNA recombination, repair and replication. The activity of RPA is mediated by single-stranded DNA binding and protein interactions (By similarity).
    
  0.425
Q337B1_ORYSJ
DNA excision repair protein ERCC-1, putative, expressed.
    
  0.424
Q6Z2J8_ORYSJ
Os02g0732700 protein.
    
  0.423
A0A0P0XZP0
Os11g0180600 protein.
    
  0.422
A0A0P0UZW0
Os01g0193900 protein.
    
  0.420
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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