Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WD88Os04g0553000 protein; Belongs to the MlaE permease family. (371 aa)    
Predicted Functional Partners:
Q5JL23_ORYSJ
cDNA clone:001-032-B11, full insert sequence.
  
 0.990
Q10FF1_ORYSJ
cDNA clone:J023105K03, full insert sequence.
 
  
 0.799
A0A0N7KJR2
Os04g0627200 protein.
    
 0.736
Q5ZDZ8_ORYSJ
cDNA clone:J013162I04, full insert sequence.
  
  
 0.680
Q0JP16_ORYSJ
cDNA clone:J023004L24, full insert sequence.
   
  
 0.639
Q10LW5_ORYSJ
ATP-dependent transporter ycf16, putative, expressed.
      
 0.626
Q10MA7_ORYSJ
cDNA clone:J023008D19, full insert sequence.
      
 0.626
Q0INW6_ORYSJ
Os12g0283800 protein.
      
 0.623
A0A0P0XV63
Os10g0434900 protein.
  
  
 0.621
STAR1
Protein STAR1; Associates with STAR2 to form a functional transmembrane ABC transporter required for detoxification of aluminum (Al) in roots. Can specifically transport UDP-glucose; Belongs to the ABC transporter superfamily. ABCI family.
  
  
 0.621
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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