STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WD92Os04g0539300 protein. (259 aa)    
Predicted Functional Partners:
APR1
Probable 5'-adenylylsulfate reductase 1, chloroplastic; Reduces sulfate for Cys biosynthesis.
    
 0.873
4CL2
Probable 4-coumarate--CoA ligase 2.
    
 0.867
4CLL9
4-coumarate--CoA ligase-like 9.
    
 0.863
Q69RP3_ORYSJ
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
    
  0.841
CAD2
Cinnamyl alcohol dehydrogenase 2; Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde and sinapaldehyde to their respective alcohols. Plays the major role in monolignol biosynthesis. Functions cooperatively with COMT in the culm internodes for the biosynthesis of monolignols, the lignin precursors. May be involved in lignin biosynthesis in leaves and roots. Belongs to the zinc-containing alcohol dehydrogenase family.
    
 0.836
4CL1
Probable 4-coumarate--CoA ligase 1; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.835
4CL3
Probable 4-coumarate--CoA ligase 3.
    
 0.835
4CL5
Probable 4-coumarate--CoA ligase 5.
    
 0.835
NOMT_ORYSJ
Naringenin 7-O-methyltransferase; S-adenosyl-L-methionine-dependent methyltransferase involved in the biosynthesis of the sakuranetin, an inducible defense mechanism of O.sativa against pathogen attack; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. COMT subfamily.
     
 0.832
Q6K3G8_ORYSJ
cDNA clone:J023051O20, full insert sequence.
   
 0.830
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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