Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WDN5Os04g0576600 protein. (74 aa)    
Predicted Functional Partners:
Q6K3D4_ORYSJ
Os02g0281000 protein.
    
  0.599
MPK2
Mitogen-activated protein kinase 2; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.592
MPK4
Mitogen-activated protein kinase 4.
   
 0.592
A0A0N7KQ53
Os08g0517800 protein.
  
     0.529
A0A0P0WQ76
Os05g0538500 protein.
  
     0.529
A0A0P0XP28
Os09g0498300 protein.
  
     0.526
Q75GX3_ORYSJ
cDNA clone:001-034-E02, full insert sequence.
  
     0.526
Q2QLT3_ORYSJ
Thaumatin-like protein, putative.
  
     0.525
Q2QNE1_ORYSJ
cDNA clone:J013136G04, full insert sequence.
  
 
   0.525
Q2QZ50_ORYSJ
cDNA, clone: J100071A15, full insert sequence.
  
 
   0.514
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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