STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WGW5Os04g0683600 protein. (419 aa)    
Predicted Functional Partners:
Q5VQH6_ORYSJ
cDNA clone:J033067O18, full insert sequence.
      
 0.613
OBGC2_ORYSJ
Probable GTP-binding protein OBGC2; May bind GTP and have GTPase activity.
      
 0.613
WDR12
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
      
 0.613
A0A0P0UYL5
Os01g0162200 protein.
  
 
   0.469
B7F9F7_ORYSJ
cDNA, clone: J075193C19, full insert sequence.
  
     0.449
A0A0P0XRL9
Os10g0145800 protein.
  
 
   0.438
Q6Z8Z4_ORYSJ
Os02g0110600 protein.
    
 
 0.423
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.