Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WHF3Os05g0123400 protein. (452 aa)    
Predicted Functional Partners:
A0A0N7KI63
Os03g0786900 protein.
    
   0.586
Q0IWN0_ORYSJ
Os10g0498800 protein.
    
   0.586
Q5QNC8_ORYSJ
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
   0.586
Q6Z0Z6_ORYSJ
Os02g0550400 protein.
    
   0.581
Q6ZFT6_ORYSJ
Os02g0714500 protein.
    
   0.581
ISPE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic; Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. Is essential for chloroplast development (By similarity); Belongs to the GHMP kinase family. IspE subfamily.
     
 0.564
ISPG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic; Enzyme of the plastid non-mevalonate pathway for isoprenoid biosynthesis that converts 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Is essential for chloroplast development (By similarity); Belongs to the IspG family.
    
  0.559
Q69PT1_ORYSJ
Os06g0326700 protein.
   
 
  0.533
Q6ZFU0_ORYSJ
cDNA clone:J023087O16, full insert sequence.
   
 
  0.533
B9G0L3_ORYSJ
Os08g0366300 protein.
   
 
  0.512
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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