STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WI20Os05g0153132 protein. (262 aa)    
Predicted Functional Partners:
A0A0P0WHC1
Os05g0122400 protein.
   
 0.848
Q0DHI3_ORYSJ
Os05g0463900 protein.
   
 0.848
Q0E4T3_ORYSJ
Os02g0101700 protein.
   
 0.840
A0A0N7KH34
Os03g0294900 protein; Belongs to the ubiquitin-activating E1 family.
  
 0.820
A0A0P0XAH7
Os07g0692900 protein; Belongs to the ubiquitin-activating E1 family.
  
 0.820
A0A0P0Y5Y8
Os12g0105975 protein.
  
 0.820
Q2RBM4_ORYSJ
Ubiquitin-activating enzyme E1 2, putative, expressed; Belongs to the ubiquitin-activating E1 family.
  
 0.820
A0A0P0UY23
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.790
A0A0P0UYQ2
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 0.790
Q5W6S2_ORYSJ
Os05g0345500 protein.
   
 0.777
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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