STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WI27Os05g0152900 protein. (400 aa)    
Predicted Functional Partners:
Q5JLZ9_ORYSJ
cDNA clone:J033086D07, full insert sequence.
    
 0.797
Q8W0I1_ORYSJ
cDNA clone:J033117D10, full insert sequence; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.697
Q0D730_ORYSJ
cDNA clone:J033048J08, full insert sequence.
    
  0.606
Q0DQD2_ORYSJ
Os03g0607800 protein.
    
  0.606
Q5VRV7_ORYSJ
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
  0.561
A0A0P0V1K5
Os01g0276200 protein.
    
  0.528
Q10M45_ORYSJ
Mitochondrial import receptor subunit TOM40, putative, expressed.
    
  0.528
Q6I5X7_ORYSJ
cDNA clone:J013026B01, full insert sequence.
     
  0.522
A0A0N7KE18
Mitochondrial Rho GTPase.
     
  0.485
A0A0P0W5I4
Os03g0810700 protein.
     
  0.485
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.