STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WI45Os05g0149200 protein. (374 aa)    
Predicted Functional Partners:
CMT2
DNA (cytosine-5)-methyltransferase CMT2; Involved in CpXpG DNA methylation.
    
  0.884
A0A0P0Y1Y5
Adenosylhomocysteinase.
     
 0.881
Q7XQ85_ORYSJ
cDNA clone:002-105-C04, full insert sequence.
     
 0.867
MET1B
DNA (cytosine-5)-methyltransferase 1B; Major CG methylase that methylates chromatin CpG residues and maintains DNA methylation. Plays a major role in genomic imprinting, regulation of embryogenesis and seed viability. Maintains DNA methylation at the FIE1 gene locus in the embryo.
    
  0.866
MET1A
DNA (cytosine-5)-methyltransferase 1A; Probably methylates CpG residues and maintains DNA methylation. May be involved in methylation-dependent gene silencing. May play a minor role in the maintenance of DNA methylation. Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
    
  0.866
ACC1
1-aminocyclopropane-1-carboxylate synthase 1; Catalyzes the formation of 1-aminocyclopropane-1-carboxylate, a direct precursor of ethylene in higher plants.
     
 0.863
A0A0P0XZG5
Os11g0171400 protein.
   
 0.858
Q2QMH0_ORYSJ
Tetratricopeptide repeat protein, putative, expressed.
   
 0.816
A0A0P0UZP7
Os01g0192900 protein.
     
 0.815
A0A0P0WIY3
Os05g0196600 protein.
     
 0.815
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.