Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WI69Os05g0147150 protein. (200 aa)    
Predicted Functional Partners:
Q7XHX9_ORYSJ
cDNA clone:J023094A01, full insert sequence.
   
 
 0.967
Q10RP1_ORYSJ
Phage head-tail adaptor family protein, expressed.
   
 
 0.966
Q5N7Y0_ORYSJ
Os01g0911000 protein.
   
 
 0.966
P0650C03.25
DEAD-box ATP-dependent RNA helicase 32; Belongs to the DEAD box helicase family. DDX10/DBP4 subfamily.
   
 
 0.963
Q6EQN5_ORYSJ
Os09g0352400 protein.
   
 
 0.952
Q0IPS3_ORYSJ
Os12g0170700 protein.
   
   0.947
OJA1212_C06.1
Putative hepatocellular carcinoma-associated antigen 66.
   
 
 0.947
B7F947_ORYSJ
cDNA, clone: J075009F20, full insert sequence.
   
   0.944
Q657Z6_ORYSJ
cDNA clone:J013109E04, full insert sequence.
   
 
 0.944
B9FC62_ORYSJ
Os04g0585300 protein.
   
   0.941
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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