Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A0P0WII3Os05g0165450 protein. (248 aa)    
Predicted Functional Partners:
Q10N76_ORYSJ
cDNA clone:006-206-F02, full insert sequence.
   
 0.954
MUS81
Crossover junction endonuclease MUS81; Interacts with EME1 to form a DNA structure-specific endonuclease with substrate preference for branched DNA structures with a 5'-end at the branch nick. Typical substrates include 3'-flap structures, D-loops, replication forks, nicked Holliday junctions and also intact Holliday junctions with a reduced efficiency. May be required in mitosis for the processing of stalled or collapsed replication fork intermediates. Plays a role in DNA repair and in genotoxic stress-induced homologous recombination (HR) in somatic cells. Mediates a subset of meioti [...]
   
 0.928
Q5VRD9_ORYSJ
Os01g0178100 protein.
    
 0.902
A0A0P0V657
Os01g0660500 protein.
    
 0.898
Q7XHW1_ORYSJ
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
 0.898
Q337B1_ORYSJ
DNA excision repair protein ERCC-1, putative, expressed.
   
 0.854
Q10T59_ORYSJ
cDNA clone:J013151H20, full insert sequence.
   
 0.848
Q10T60_ORYSJ
Os03g0100300 protein.
   
 0.848
A0A0P0VQJ4
Os02g0780800 protein.
    
 0.798
A0A0P0WAF3
Os04g0433800 protein.
    
 0.798
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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