STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WIY4Os05g0188600 protein. (145 aa)    
Predicted Functional Partners:
NDX1
Protein NEOXANTHIN-DEFICIENT 1; Required for neoxanthin biosynthesis. Probably not involved directly in the enzymatic conversion of violaxanthin to neoxanthin. Is necessary but not sufficient for neoxanthin synthesis.
      
 0.676
A0A0P0V8W3
Os01g0777000 protein.
      
 0.624
A0A0P0X9D8
Os07g0619600 protein.
      
 0.623
Q2QNB5_ORYSJ
Suppressor of forked protein containing protein, expressed.
   
  
 0.592
A0A0P0VXN2
Os03g0358000 protein.
      
 0.587
Q6K3D4_ORYSJ
Os02g0281000 protein.
   
 
 0.577
Q84MN8_ORYSJ
Bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthethase, putative, expressed.
   
  
 0.568
Q8LHQ6_ORYSJ
Os07g0619100 protein.
      
 0.565
Q94LH1_ORYSJ
cDNA clone:J023104J05, full insert sequence.
      
 0.565
A0A0P0WFG4
Os04g0641400 protein.
      
 0.545
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.