Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WKA9Os05g0298700 protein. (201 aa)    
Predicted Functional Partners:
A0A0P0VVB4
Os03g0243200 protein.
    
 0.678
Q6ERD4_ORYSJ
Os09g0397900 protein.
    
 0.678
Q652S1_ORYSJ
cDNA clone:J013116E07, full insert sequence.
    
 0.617
A0A0P0VWT0
Os03g0281800 protein.
    
 0.609
A0A0P0XZG5
Os11g0171400 protein.
    
 0.608
Q0DY89_ORYSJ
Os02g0708600 protein.
    
 0.560
Q0DY90_ORYSJ
cDNA clone:002-114-G07, full insert sequence.
    
 0.560
A0A0P0UXE6
Os01g0103700 protein.
    
 0.558
B7EZ59_ORYSJ
cDNA clone:002-100-D10, full insert sequence.
    
 0.558
Q6YX88_ORYSJ
cDNA clone:006-305-H09, full insert sequence.
    
  0.521
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.