Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
A0A0P0WN65Os05g0456925 protein. (492 aa)    
Predicted Functional Partners:
RAN3
GTP-binding nuclear protein Ran-3; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity).
    
 0.771
RAN1
GTP-binding nuclear protein Ran-1; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity).
    
 0.771
RAN2
GTP-binding nuclear protein Ran-2; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle (By similarity).
    
 0.771
A0A0P0XNM8
Os09g0481200 protein.
   
 
 0.720
PSAH
Photosystem I reaction center subunit VI, chloroplastic; Possible role could be the docking of the LHC I antenna complex to the core complex; Belongs to the psaH family.
   
 
 0.719
Q84PB5_ORYSJ
cDNA clone:001-002-E09, full insert sequence.
   
 
 0.707
Q8S7H8_ORYSJ
Photosystem I reaction center subunit III, chloroplast, putative, expressed.
   
 
 0.706
A0A0P0WMG5
Os05g0409200 protein.
   
 0.701
Q65XN1_ORYSJ
cDNA, clone: J090026K18, full insert sequence.
   
 0.701
Q7XTG4_ORYSJ
cDNA clone:001-004-G12, full insert sequence.
   
 
 0.698
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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