Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WN84Os05g0459600 protein. (183 aa)    
Predicted Functional Partners:
Q6Z692_ORYSJ
Methyltransferase.
      
 0.579
A0A0P0UZW0
Os01g0193900 protein.
    
 0.451
Q10QM7_ORYSJ
cDNA clone:J023042L16, full insert sequence.
      
 0.447
Q69IM3_ORYSJ
Os09g0515100 protein.
      
 0.447
Q6I575_ORYSJ
cDNA clone:J013155K07, full insert sequence.
      
 0.424
Q6H6D5_ORYSJ
cDNA clone:J033043N20, full insert sequence.
    
 
 0.417
C7J989_ORYSJ
Os11g0168600 protein.
    
 
 0.416
OJ000315_02.1
Probable protein phosphatase 2C 39.
      
 0.416
Q0DSD6_ORYSJ
Os03g0315800 protein.
    
   0.415
RBR2
Retinoblastoma-related protein 2; Regulator of biological processes that recruits a histone deacetylase to control gene transcription. May play a role in the entry into mitosis, negatively regulating the cell proliferation. Formation of stable complexes with geminiviridae replication-associated proteins may create a cellular environment which favors viral DNA replication (By similarity).
    
 0.410
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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