STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WNS9Os05g0486300 protein. (256 aa)    
Predicted Functional Partners:
Q6K272_ORYSJ
cDNA clone:J033135J15, full insert sequence.
   
 0.979
Q7XZZ2_ORYSJ
Not1 N-terminal domain, CCR4-Not complex component family protein, expressed.
    
 0.979
A0A0N7KGF0
Os03g0102300 protein.
   
 0.970
A0A0N7KS71
Os10g0556700 protein.
   
 0.970
A0A0P0VRX9
Os03g0102366 protein.
   
 0.970
A0A0P0VRZ3
Os03g0102333 protein.
   
 0.970
A0A0P0XX27
Os10g0556600 protein.
   
 0.970
A0A0P0VHV6
Os02g0296400 protein.
    
 0.968
A0A0P0VHZ9
Os02g0301700 protein.
    
 0.968
Q10CF3_ORYSJ
Cell differentiation protein rcd1, putative, expressed.
    
 0.968
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.