Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WP77Os05g0502700 protein. (233 aa)    
Predicted Functional Partners:
Q0D8F3_ORYSJ
cDNA clone:J013102N10, full insert sequence.
      
 0.623
Q10LQ8_ORYSJ
PP1/PP2A phosphatases pleiotropic regulator PRL1, putative, expressed.
      
 0.623
Q6K715_ORYSJ
cDNA clone:J013118H02, full insert sequence.
      
 0.623
Q850Z4_ORYSJ
Os03g0831100 protein.
      
 0.623
49D11.11
cDNA clone:J013151N03, full insert sequence.
      
 0.608
Q2MJA7_ORYSJ
NAD dependent epimerase/dehydratase family protein, expressed.
      
 0.587
C7JA48_ORYSJ
Os12g0478200 protein.
      
 0.581
RL9
Probable transcription factor RL9; Probable transcription factor that regulates abaxial identity during leaf development. Modulates leaf rolling by regulating the programmed cell death (PCD) of abaxial mesophyll and sclerenchyma cells during leaf development.
    
 
 0.563
A0A0P0UZZ4
Os01g0229300 protein.
      
 0.557
A0A0N7KLH2
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
      
 0.546
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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