Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WPU2Os05g0533900 protein. (472 aa)    
Predicted Functional Partners:
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
 
 0.951
Q0JMF9_ORYSJ
ATP-dependent Clp protease proteolytic subunit.
 
 0.950
Q50LH5_ORYSJ
ATP-dependent Clp protease proteolytic subunit.
 
 0.945
Q0JNQ7_ORYSJ
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
 
 0.940
Q10LK7_ORYSJ
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
 
 0.939
Q0JBL5_ORYSJ
ATP-dependent Clp protease proteolytic subunit.
 
 0.938
Q5VQ13_ORYSJ
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
 
 0.938
Q6H7I9_ORYSJ
ATP-dependent Clp protease proteolytic subunit.
 
 0.938
Q7XBR2_ORYSJ
ATP-dependent Clp protease proteolytic subunit.
 
 0.937
Q6L4S1_ORYSJ
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
 
 0.926
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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