Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WR56Os05g0588100 protein. (284 aa)    
Predicted Functional Partners:
C7J6H5_ORYSJ
Os09g0513100 protein.
     
  0.896
Q2RAM0_ORYSJ
Lipase family protein.
     
  0.896
Q7XTS6_ORYSJ
cDNA clone:J023027J22, full insert sequence.
     
  0.896
A0A0P0VJM6
Os02g0514500 protein.
   
 0.876
A0A0P0W9Q9
Os04g0394100 protein.
   
 0.876
A0A0P0XIP2
Os08g0535700 protein.
   
 0.876
OsJ_16563
Probable carboxylesterase Os04g0669600; Possesses carboxylesterase activity in vitro.
  
  
 
0.872
CAEH3_ORYSJ
Probable inactive carboxylesterase Os04g0669700; Belongs to the AB hydrolase superfamily. AB hydrolase 2 family.
  
  
 
0.872
OsJ_16562
Probable carboxylesterase Os04g0669500; Possesses carboxylesterase activity in vitro.
  
  
 
0.870
A0A0P0X8I7
Os07g0602800 protein.
   
  0.863
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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