Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WS15Os06g0111600 protein. (1054 aa)    
Predicted Functional Partners:
A0A0P0XYJ2
Os11g0136500 protein.
  
 0.971
Q2QY38_ORYSJ
4'-phosphopantetheinyl transferase superfamily protein, expressed.
  
 0.971
Q6Z0U9_ORYSJ
cDNA clone:002-103-A03, full insert sequence.
  
 0.971
Q0DKT8_ORYSJ
Os05g0144000 protein; Belongs to the membrane-bound acyltransferase family.
  
 
 0.970
A0A0P0VQF9
Os02g0783625 protein.
  
 
 0.945
A0A0P0VQK9
Os02g0783700 protein.
  
 
 0.945
Q10MS3_ORYSJ
Malonyl CoA-acyl carrier protein transacylase containing protein, expressed.
  
 
 0.910
Q5NBQ1_ORYSJ
cDNA clone:006-203-G09, full insert sequence.
   
  
 0.905
Q5N7L5_ORYSJ
cDNA clone:J023008N17, full insert sequence.
  
 
 0.899
Q67VM1_ORYSJ
cDNA clone:001-016-B09, full insert sequence.
  
 
 0.899
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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