Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WS35Os06g0107000 protein. (270 aa)    
Predicted Functional Partners:
A0A0P0WFG4
Os04g0641400 protein.
    
   0.691
C7J0K5_ORYSJ
Os03g0138400 protein.
    
   0.691
Q0D3L5_ORYSJ
Os07g0680300 protein.
    
   0.691
Q0IX96_ORYSJ
cDNA clone:J013075P13, full insert sequence; Belongs to the glutamine synthetase family.
    
   0.691
Q0JCT6_ORYSJ
Os04g0450200 protein.
    
   0.691
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
    
   0.691
Q5N7Y0_ORYSJ
Os01g0911000 protein.
    
   0.691
Q5WMY1_ORYSJ
cDNA clone:J023010L13, full insert sequence.
    
   0.691
Q67TV5_ORYSJ
cDNA clone:006-311-A10, full insert sequence.
    
   0.691
Q69SX2_ORYSJ
cDNA clone:001-205-A02, full insert sequence.
    
   0.691
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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