Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WS55Os06g0108500 protein. (213 aa)    
Predicted Functional Partners:
HD1
Zinc finger protein HD1; Probable transcription factor involved in the regulation of flower development. Required for the promotion of flowering under short day (SD) conditions and the suppression of flowering under long day (LD) conditions. Regulates positively the floral activator HEADING DATE 3a (HD3A) under SD and negatively under LD conditions. Belongs to the CONSTANS family.
    
 0.722
Q0JP39_ORYSJ
Os01g0246500 protein.
     
 0.612
FL
Probable transcription factor FL; Probable transcription factor (By similarity). Together with APO1, involved in the temporal regulation of meristem size and identity during both vegetative and reproductive developments through interaction with APO1. Promotes flowering ; Belongs to the FLO/LFY family.
    
 
 0.590
HD3A
Protein HEADING DATE 3A; Probable mobile flower-promoting signal (florigen) that moves from the leaf to the shoot apical meristem (SAM) and induces flowering. Promotes the transition from vegetative growth to flowering downstream of HD1 and EHD1 under short day (SD) conditions. Acts upstream of MADS14 and MADS15. Belongs to the phosphatidylethanolamine-binding protein family.
      
 0.560
LDL3_ORYSJ
Lysine-specific histone demethylase 1 homolog 3; Probable histone demethylase; Belongs to the flavin monoamine oxidase family.
    
 
 0.555
A0A0P0V473
Os01g0566050 protein.
     
 0.552
ELF3-2
ELF3-like protein 2; Involved in the regulation of flowering time.
     
 0.552
HD3B
Protein HEADING DATE 3B; Involved in the regulation of flowering time under short day (SD) and long day (LD) conditions. Functions as floral promoter by negatively regulating GHD7, a repressor of the photoperiodic control of flowering. Acts as floral activator in the LD photoperiodic pathway. Involved in blue light-induced activation of EHD1 expression to promote flowering under SD conditions.
     
 0.552
MADS16
MADS-box transcription factor 16; Probable transcription factor involved in the development of floral organs. Required for normal development of lodicules and stamens (whorls 2 and 3). May function as a heterodimer with MADS4.
  
  
0.550
WRKY30
cDNA clone:J013025I24, full insert sequence.
    
 0.536
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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