Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WSQ0Os06g0137800 protein. (92 aa)    
Predicted Functional Partners:
Q8W314_ORYSJ
Threonine dehydratase.
  
 
 0.955
Q10D68_ORYSJ
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.952
Q6ZFI6_ORYSJ
cDNA clone:J013000A23, full insert sequence.
    
 0.951
A0A0P0Y248
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.945
Q2QT32_ORYSJ
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.945
Q75HP7_ORYSJ
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
   
 0.927
P0648C09.14
cDNA clone:J033132G05, full insert sequence.
   
 0.927
A0A0P0V7A3
Os01g0711400 protein.
    
 0.918
A0A0P0WYK7
Os06g0611900 protein.
    
 0.918
P0560C03.1
Putative threonine synthase.
     
 0.917
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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