Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WT46Os06g0154400 protein. (193 aa)    
Predicted Functional Partners:
A0A0P0VBA3
Os01g0887400 protein.
      
 0.714
Q2R181_ORYSJ
Os11g0614900 protein.
      
 0.627
APR1
Probable 5'-adenylylsulfate reductase 1, chloroplastic; Reduces sulfate for Cys biosynthesis.
      
 0.592
Q8H2N8_ORYSJ
Os07g0115600 protein.
    
 
 0.528
Q10S45_ORYSJ
Ankyrin repeat protein, chloroplast, putative, expressed.
      
 0.516
Q6YW01_ORYSJ
cDNA clone:001-124-C09, full insert sequence.
    
   0.515
Q6YTX5_ORYSJ
Os07g0609000 protein.
      
 0.502
Q0DB96_ORYSJ
Os06g0589700 protein.
      
 0.450
Q0J5T2_ORYSJ
Os08g0406400 protein.
      
 0.428
A3C052_ORYSJ
cDNA clone:J013047J08, full insert sequence.
      
 0.427
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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