Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
A0A0P0WT52Os06g0176100 protein; Belongs to the glycosyltransferase 47 family. (311 aa)    
Predicted Functional Partners:
B9GDC7_ORYSJ
Os12g0508266 protein.
      
 0.622
B7F9C5_ORYSJ
cDNA, clone: J075169H23, full insert sequence.
    
 0.577
GINT1
Glucosamine inositolphosphorylceramide transferase 1; Essential protein. Glycosyltransferase that mediates the glycosylation of glycosylinositol phosphorylceramides (GIPCs), the major sphingolipids in the plasma membrane; acts as a HexN(Ac)-specific GIPC sugar transferase. Responsible for the glycosylation of a subgroup of GIPCs found in seeds and pollen that contain GlcNAc and GlcN (GlcN(Ac)). Maybe involved in the maintenance of cell-cell adhesion.
    
 0.577
Q9AUK5_ORYSJ
Os03g0684500 protein.
    
 0.577
Q5VMX9_ORYSJ
Os06g0158100 protein.
      
 0.555
Q6ERI5_ORYSJ
Os09g0334500 protein.
      
 0.555
Q6ZB59_ORYSJ
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
  
 0.553
Q2R8W8_ORYSJ
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.547
Q5SMV5_ORYSJ
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.547
Q5W6C5_ORYSJ
Carboxypeptidase; Belongs to the peptidase S10 family.
      
 0.547
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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