STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WTT4Os06g0208700 protein. (154 aa)    
Predicted Functional Partners:
A0A0P0XNM8
Os09g0481200 protein.
   
 
 0.918
Q84PB5_ORYSJ
cDNA clone:001-002-E09, full insert sequence.
   
 
 0.917
Q8S7H8_ORYSJ
Photosystem I reaction center subunit III, chloroplast, putative, expressed.
   
 
 0.916
A0A0P0X592
Os07g0435300 protein.
   
 
 0.913
PSAH
Photosystem I reaction center subunit VI, chloroplastic; Possible role could be the docking of the LHC I antenna complex to the core complex; Belongs to the psaH family.
   
 
 0.910
Q84PB4_ORYSJ
Chloroplast photosystem I reaction center subunit II-like protein.
   
 
 0.910
psaI
Photosystem I reaction center subunit VIII; May help in the organization of the PsaL subunit. Belongs to the PsaI family.
    
 
 0.899
Q7XTG4_ORYSJ
cDNA clone:001-004-G12, full insert sequence.
   
   0.883
Q2QWN3_ORYSJ
Photosystem I reaction centre subunit N, chloroplast, putative, expressed.
   
 
 0.876
psaJ
Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family.
    
 
 0.873
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.