Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WTY0Os06g0191700 protein; Belongs to the cytochrome P450 family. (470 aa)    
Predicted Functional Partners:
APR1
Probable 5'-adenylylsulfate reductase 1, chloroplastic; Reduces sulfate for Cys biosynthesis.
    
  0.667
NIA1
Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.651
Q6ZC33_ORYSJ
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.651
Q6ZHH7_ORYSJ
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
 0.651
A0A0P0WS15
Os06g0111600 protein.
  
 0.574
Q2QWC8_ORYSJ
Cytochrome P450 family protein.
  
 
  0.554
Q7G4F7_ORYSJ
Cytochrome P450 98A1, putative.
  
 
  0.488
Q5ZCK9_ORYSJ
cDNA clone:J033069O22, full insert sequence; Belongs to the sterol desaturase family.
   
 0.466
A0A0P0W704
Os04g0174100 protein; Belongs to the cytochrome P450 family.
  
 
  0.458
Q10SX1_ORYSJ
cDNA clone:002-150-A02, full insert sequence; Belongs to the sterol desaturase family.
   
 0.427
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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