Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WWA7Os06g0347700 protein. (147 aa)    
Predicted Functional Partners:
FCA
Flowering time control protein FCA; Plays a major role in the promotion of the transition of the vegetative meristem to reproductive development. Required for RNA-mediated chromatin silencing of a range of loci in the genome. Cotranscriptionally recognizes aberrant RNA and marks it for silencing. Controls alternative cleavage and polyadenylation on pre- mRNAs and antisense RNAs (By similarity). Regulates flowering time, seed size and cell volume, probably via the modulation of cell size.
      
 0.623
Q69V59_ORYSJ
cDNA clone:006-307-G05, full insert sequence.
      
 0.622
LECRK3
G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3; Involved in resistance against the herbivorous insect brown planthopper (N.lugens, BPH). Member of the BPH3 (BPH resistance locus 3) cluster which contains LECRK1, LECRK2 and LECRK3. Belongs to the protein kinase superfamily. Ser/Thr protein kinase family.
    
 0.602
Q7XKV0_ORYSJ
Os04g0475200 protein.
    
 0.602
Q0IYZ3_ORYSJ
Os10g0146200 protein.
    
 0.548
Q10P77_ORYSJ
cDNA clone:J023088H12, full insert sequence.
    
 0.548
Q69JY6_ORYSJ
cDNA clone:J013131N11, full insert sequence.
    
 0.548
OsJ_06629
Flowering-promoting factor 1-like protein 3; Belongs to the FPF1 family.
      
 0.540
Q6YSC5_ORYSJ
cDNA clone:J023054A11, full insert sequence.
      
 0.540
A0A0P0XK11
Os08g0548700 protein.
    
 0.537
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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