STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WX20Os06g0513050 protein. (45 aa)    
Predicted Functional Partners:
A0A0P0W0F5
Os03g0629800 protein.
      
 0.509
A3BNC1_ORYSJ
cDNA clone:J023024E09, full insert sequence.
      
 0.509
Q7XIL6_ORYSJ
Os07g0162450 protein.
      
 0.509
A0A0P0V3N0
Os01g0537250 protein.
      
 0.491
Q0IQB5_ORYSJ
Glutamate-rich WD repeat-containing protein 1, putative, expressed.
      
 0.469
A0A0P0XZH2
Os11g0134950 protein.
      
 0.406
Q9FTR9_ORYSJ
cDNA clone:001-125-D07, full insert sequence; Belongs to the Bowman-Birk serine protease inhibitor family.
      
 0.400
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.