STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WYZ7Os06g0609301 protein. (77 aa)    
Predicted Functional Partners:
A0A0P0XXH3
Os10g0558100 protein.
    
 0.612
Q2QR41_ORYSJ
Protease inhibitor/seed storage/LTP family protein.
    
 0.612
Q67VB1_ORYSJ
Os06g0239100 protein.
    
 0.612
Q6Z7S6_ORYSJ
Os02g0740700 protein.
    
 0.612
Q94LQ0_ORYSJ
Os10g0558150 protein.
    
 0.612
Q94LQ1_ORYSJ
Os10g0558125 protein.
    
 0.612
Q94LQ4_ORYSJ
Matrixin family protein, expressed.
    
 0.612
Q7XLA1_ORYSJ
cDNA clone:002-180-G09, full insert sequence.
     
 0.584
A0A0P0W8E2
Os04g0300600 protein.
     
 0.578
Q0JEB7_ORYSJ
cDNA, clone: J075170K16, full insert sequence.
     
 0.578
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.