STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WZZ8Os06g0654900 protein. (81 aa)    
Predicted Functional Partners:
HD5
Nuclear transcription factor Y subunit B-11; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering, independently of HD1 and GHD7. Controls flowering time by negatively regulating the expression of EHD1 and HD3A. Regulates plant height by promoting cell elongation in the internodes. Component of the NF-Y/HAP transcription factor complex (By similarity); Belongs to the NFYB/HAP3 subunit family.
    
 
 0.793
C7J0W5_ORYSJ
Os04g0429200 protein; Belongs to the peptidase C19 family.
    
  0.614
OsHAP5A
cDNA, clone: J100067L16, full insert sequence.
   
 
 0.596
A0A0N7KPF9
Os08g0206500 protein.
    
 
 0.595
NFYC2
Nuclear transcription factor Y subunit C-2; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering, independently of HD1 and GHD7. Controls flowering time by negatively regulating the expression of EHD1 and HD3A. Component of the NF-Y/HAP transcription factor complex (By similarity); Belongs to the NFYC/HAP5 subunit family.
    
 
 0.595
Q0J0W2_ORYSJ
Os09g0480700 protein.
    
 
 0.595
NFYC4
Nuclear transcription factor Y subunit C-4; Probable transcription factor involved in the regulation of flowering time under long day (LD) conditions. Functions as repressor of flowering, independently of HD1 and GHD7. Controls flowering time by negatively regulating the expression of EHD1 and HD3A. Component of the NF-Y/HAP transcription factor complex (By similarity); Belongs to the NFYC/HAP5 subunit family.
    
 
 0.595
OsHAP5G
HAP5 subunit of HAP complex.
    
 
 0.595
HAP5
Transcription binding factor.
    
 
 0.595
P0455C04.16
cDNA, clone: J075175B02, full insert sequence.
    
 
 0.595
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.