STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0X861RuvB-like helicase. (167 aa)    
Predicted Functional Partners:
B7FAF4_ORYSJ
RuvB-like helicase; Belongs to the RuvB family.
  
0.998
Q5QMH1_ORYSJ
RuvB-like helicase; Belongs to the RuvB family.
  
0.998
ARP4
Actin-related protein 4; Involved in several developmental processes including organization of plant organs, flowering time, anther development, flower senescence and fertility, probably by regulating the chromatin structure; Belongs to the actin family. ARP4 subfamily.
   
 0.994
Q5TKQ2_ORYSJ
Os05g0540800 protein.
   
 0.991
A0A0N7KPE4
Os08g0192400 protein.
    
 0.987
A0A0P0VNC6
Os02g0689800 protein.
   
 0.983
ARP9
Actin-related protein 9; Belongs to the actin family. ARP8 subfamily.
   
 0.981
ARP5
Actin-related protein 5.
    
 0.978
Q10KW5_ORYSJ
cDNA clone:002-150-E06, full insert sequence.
    
 0.978
A0A0N7KIR4
Os04g0274400 protein.
    
 0.970
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.