STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0XA20Os07g0675300 protein. (196 aa)    
Predicted Functional Partners:
A0A0P0WQX3
Os05g0566200 protein.
      
 0.528
A0A0P0XDY8
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
      
 0.528
A0A0P0YAB0
Os12g0484375 protein.
      
 0.528
Q6YUT7_ORYSJ
Os02g0191000 protein; Belongs to the disease resistance NB-LRR family.
      
 0.528
Q6YZW1_ORYSJ
cDNA clone:001-131-H10, full insert sequence.
      
 0.528
Q6Z0Y9_ORYSJ
cDNA clone:001-038-G01, full insert sequence; Belongs to the WD repeat SEC13 family.
      
 0.510
Q6ZH81_ORYSJ
Os02g0594100 protein; Belongs to the protein kinase superfamily.
      
 0.509
Q75KY5_ORYSJ
Os05g0187500 protein.
      
 0.433
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.