STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0XE15Os08g0269800 protein. (155 aa)    
Predicted Functional Partners:
Q0DY92_ORYSJ
Os02g0708300 protein.
    
 0.686
Q0JRD5_ORYSJ
cDNA clone:001-025-F02, full insert sequence.
    
 0.686
Q53NW5_ORYSJ
Skp1 family, tetramerisation domain containing protein, expressed; Belongs to the SKP1 family.
   
 0.685
C7IY94_ORYSJ
Os02g0169800 protein.
    
 0.600
Q6H4V4_ORYSJ
cDNA clone:J023003N20, full insert sequence.
    
 0.600
A0A0P0V765
Os01g0706200 protein; Belongs to the cullin family.
    
 0.577
A0A0P0WHY1
Os05g0149600 protein.
    
 0.577
A0A0P0WIW4
Os05g0193900 protein; Belongs to the cullin family.
    
 0.577
A0A0P0Y8F5
Os12g0236250 protein; Belongs to the cullin family.
    
 0.577
Q5JMQ6_ORYSJ
Os01g0935300 protein; Belongs to the cullin family.
    
 0.577
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.