STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0XL78Os09g0393501 protein. (128 aa)    
Predicted Functional Partners:
SODA
Superoxide dismutase [Mn], mitochondrial; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
   
 
 0.822
OsJ_19901
Superoxide dismutase [Fe] 1, chloroplastic; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
   
 
 0.822
P0535G04.31
Superoxide dismutase [Fe] 2, chloroplastic; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
   
 
 0.822
Q0D7X1_ORYSJ
Os07g0202900 protein.
    
   0.821
Q653V9_ORYSJ
cDNA clone:006-303-A09, full insert sequence; Belongs to the universal ribosomal protein uL24 family.
  
 
 0.817
Q6YYA7_ORYSJ
cDNA clone:J023065H04, full insert sequence.
   
 
 0.810
RPS17
30S ribosomal protein S17, chloroplastic; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
   
 
 0.810
Q6I600_ORYSJ
cDNA clone:J013153H24, full insert sequence.
  
 
 0.799
Q6K241_ORYSJ
cDNA clone:006-201-D06, full insert sequence.
  
 
 0.799
B7EBJ6_ORYSJ
cDNA clone:J013044N22, full insert sequence.
    
   0.798
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.