Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0N7KGI5 | A0A0N7KNI7 | A0A0N7KGI5 | A0A0N7KNI7 | Os03g0129200 protein. | Os07g0513100 protein. | 0.986 |
A0A0N7KGI5 | A0A0P0XLT0 | A0A0N7KGI5 | A0A0P0XLT0 | Os03g0129200 protein. | Os09g0374900 protein. | 0.751 |
A0A0N7KGI5 | A0A0P0XUY4 | A0A0N7KGI5 | A0A0P0XUY4 | Os03g0129200 protein. | Os10g0437200 protein. | 0.984 |
A0A0N7KGI5 | B9G2C8_ORYSJ | A0A0N7KGI5 | B9G2C8 | Os03g0129200 protein. | Os09g0252000 protein. | 0.985 |
A0A0N7KGI5 | Q0JHU4_ORYSJ | A0A0N7KGI5 | Q0JHU4 | Os03g0129200 protein. | Os01g0841800 protein. | 0.573 |
A0A0N7KGI5 | Q10RJ0_ORYSJ | A0A0N7KGI5 | Q10RJ0 | Os03g0129200 protein. | 3'-5' exonuclease family protein, expressed. | 0.984 |
A0A0N7KGI5 | Q69UI6_ORYSJ | A0A0N7KGI5 | Q69UI6 | Os03g0129200 protein. | cDNA clone:001-119-G01, full insert sequence. | 0.982 |
A0A0N7KGI5 | Q6Z6A3_ORYSJ | A0A0N7KGI5 | Q6Z6A3 | Os03g0129200 protein. | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. | 0.558 |
A0A0N7KGI5 | Q75LC8_ORYSJ | A0A0N7KGI5 | Q75LC8 | Os03g0129200 protein. | 3' exoribonuclease family, domain 1 containing protein, expressed. | 0.982 |
A0A0N7KGI5 | RRP46 | A0A0N7KGI5 | Q84T68 | Os03g0129200 protein. | Exosome complex exonuclease RRP46 homolog; Probable component of the exosome 3'->5' exoribonuclease complex, a complex that degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3'-untranslated regions. May form a homodimer separately from exosome complexes and function in DNA cleavage process. Binds double-stranded DNA (dsDNA) and single-stranded RNA (ssRNA), and possesses hydrolytic DNase and phosphorolytic RNase activities in vitro. | 0.993 |
A0A0N7KNI7 | A0A0N7KGI5 | A0A0N7KNI7 | A0A0N7KGI5 | Os07g0513100 protein. | Os03g0129200 protein. | 0.986 |
A0A0N7KNI7 | A0A0P0XLT0 | A0A0N7KNI7 | A0A0P0XLT0 | Os07g0513100 protein. | Os09g0374900 protein. | 0.715 |
A0A0N7KNI7 | A0A0P0XUY4 | A0A0N7KNI7 | A0A0P0XUY4 | Os07g0513100 protein. | Os10g0437200 protein. | 0.675 |
A0A0N7KNI7 | B9G2C8_ORYSJ | A0A0N7KNI7 | B9G2C8 | Os07g0513100 protein. | Os09g0252000 protein. | 0.985 |
A0A0N7KNI7 | Q0JHU4_ORYSJ | A0A0N7KNI7 | Q0JHU4 | Os07g0513100 protein. | Os01g0841800 protein. | 0.986 |
A0A0N7KNI7 | Q10RJ0_ORYSJ | A0A0N7KNI7 | Q10RJ0 | Os07g0513100 protein. | 3'-5' exonuclease family protein, expressed. | 0.684 |
A0A0N7KNI7 | Q69UI6_ORYSJ | A0A0N7KNI7 | Q69UI6 | Os07g0513100 protein. | cDNA clone:001-119-G01, full insert sequence. | 0.981 |
A0A0N7KNI7 | Q6Z6A3_ORYSJ | A0A0N7KNI7 | Q6Z6A3 | Os07g0513100 protein. | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. | 0.985 |
A0A0N7KNI7 | Q75LC8_ORYSJ | A0A0N7KNI7 | Q75LC8 | Os07g0513100 protein. | 3' exoribonuclease family, domain 1 containing protein, expressed. | 0.981 |
A0A0N7KNI7 | RRP46 | A0A0N7KNI7 | Q84T68 | Os07g0513100 protein. | Exosome complex exonuclease RRP46 homolog; Probable component of the exosome 3'->5' exoribonuclease complex, a complex that degrades inherently unstable mRNAs containing AU-rich elements (AREs) within their 3'-untranslated regions. May form a homodimer separately from exosome complexes and function in DNA cleavage process. Binds double-stranded DNA (dsDNA) and single-stranded RNA (ssRNA), and possesses hydrolytic DNase and phosphorolytic RNase activities in vitro. | 0.993 |
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