STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0XYH4Os11g0129500 protein. (97 aa)    
Predicted Functional Partners:
Q0DY92_ORYSJ
Os02g0708300 protein.
    
 0.921
Q0JRD5_ORYSJ
cDNA clone:001-025-F02, full insert sequence.
    
 0.921
CDC6
Cell division control protein 6 homolog; May be involved in the initiation of DNA replication.
    
 0.912
A0A0N7KRK6
Os10g0214132 protein.
    
 0.839
rpl2-A
50S ribosomal protein L2, chloroplastic.
    
 0.839
RPL2
60S ribosomal protein L2, mitochondrial; Belongs to the universal ribosomal protein uL2 family.
    
 0.839
Q2QNF3_ORYSJ
60S ribosomal protein L2, putative, expressed.
    
 0.812
A0A0P0V765
Os01g0706200 protein; Belongs to the cullin family.
    
 0.788
A0A0P0VPL8
Os02g0745900 protein.
    
 0.788
A0A0P0WHY1
Os05g0149600 protein.
    
 0.788
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.